Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs74547036 chr7:20683939 C/T 2.29E-5 288 25.82 22.57 11.2 KM Plot
KIRP rs74550285 chr10:124809854 T/C 2.2E-9 285 25.62 26.37 13.17 KM Plot
KIRP rs74583425 chr15:57596793 C/T 0 281 25.67 21.22 4.07 KM Plot
KIRP rs74586180 chr1:26681272 T/C 0 277 25.67 26.4 2.52 KM Plot
KIRP rs74640938 chr10:43173724 T/C 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs74685514 chr2:47162315 G/A 2.62E-7 287 25.5 33.53 10.97 KM Plot
KIRP rs74713772 chr11:47070915 C/T 7.93E-12 288 25.57 28.03 10.82 KM Plot
KIRP rs74716375 chr12:49821480 A/C 4.93E-6 287 25.67 29.3 10.97 KM Plot
KIRP rs74738237 chr15:57596753 G/C 0 282 25.63 21.22 4.07 KM Plot
KIRP rs74752566 chr18:75523645 C/T 3.08E-5 281 26 22.37 3.73 KM Plot
KIRP rs74768667 chr16:90137135 G/A 2.6E-5 278 25.7 26.85 13.17 KM Plot
KIRP rs74808971 chr10:124796969 C/A 2.1E-9 286 25.62 26.47 13.17 KM Plot
KIRP rs74829860 chr19:8471396 C/T 3.34E-5 278 25.37 31.1 11.43 KM Plot
KIRP rs74844346 chr10:43486631 G/A 4.51E-5 287 25.7 26.4 11.43 KM Plot
KIRP rs74847724 chr10:43476392 G/A 4.61E-5 288 25.7 25.95 11.43 KM Plot